/***********************************************************************************
*	(c) Ger Versluis 2000 version 5.411 24 December 2001 (updated Jan 31st, 2003 by Dynamic Drive for Opera7)
*	For info write to menus@burmees.nl		          *
*	You may remove all comments for faster loading	          *		
***********************************************************************************/

	var NoOffFirstLineMenus=6;			// Number of first level items
	var LowBgColor='#003366';			// Background color when mouse is not over
	var LowSubBgColor='#003366';			// Background color when mouse is not over on subs
	var HighBgColor='#336699';			// Background color when mouse is over
	var HighSubBgColor='#336699';			// Background color when mouse is over on subs
	var FontLowColor='white';			// Font color when mouse is not over
	var FontSubLowColor='white';			// Font color subs when mouse is not over
	var FontHighColor='white';			// Font color when mouse is over
	var FontSubHighColor='white';			// Font color subs when mouse is over
	var BorderColor='#003366';			// Border color
	var BorderSubColor='#003366';			// Border color for subs
	var BorderWidth=1;				// Border width
	var BorderBtwnElmnts=1;			// Border between elements 1 or 0
	var FontFamily="Verdana, Arial, arial, sans-serif"	// Font family menu items
	var FontSize=9;				// Font size menu items
	var FontBold=1;				// Bold menu items 1 or 0
	var FontItalic=0;				// Italic menu items 1 or 0
	var MenuTextCentered='left';			// Item text position 'left', 'center' or 'right'
	var MenuCentered='left';			// Menu horizontal position 'left', 'center' or 'right'
	var MenuVerticalCentered='top';		// Menu vertical position 'top', 'middle','bottom' or static
	var ChildOverlap=.2;				// horizontal overlap child/ parent
	var ChildVerticalOverlap=.2;			// vertical overlap child/ parent
	var StartTop=0;				// Menu offset x coordinate
	var StartLeft=0;				// Menu offset y coordinate
	var VerCorrect=0;				// Multiple frames y correction
	var HorCorrect=0;				// Multiple frames x correction
	var LeftPaddng=3;				// Left padding
	var TopPaddng=2;				// Top padding
	var FirstLineHorizontal=1;			// SET TO 1 FOR HORIZONTAL MENU, 0 FOR VERTICAL
	var MenuFramesVertical=1;			// Frames in cols or rows 1 or 0
	var DissapearDelay=1000;			// delay before menu folds in
	var TakeOverBgColor=1;			// Menu frame takes over background color subitem frame
	var FirstLineFrame='navig';			// Frame where first level appears
	var SecLineFrame='space';			// Frame where sub levels appear
	var DocTargetFrame='space';			// Frame where target documents appear
	var TargetLoc='menu';				// span id for relative positioning
	var HideTop=0;				// Hide first level when loading new document 1 or 0
	var MenuWrap=1;				// enables/ disables menu wrap 1 or 0
	var RightToLeft=0;				// enables/ disables right to left unfold 1 or 0
	var UnfoldsOnClick=0;			// Level 1 unfolds onclick/ onmouseover
	var WebMasterCheck=0;			// menu tree checking on or off 1 or 0
	var ShowArrow=1;				// Uses arrow gifs when 1
	var KeepHilite=1;				// Keep selected path highligthed
	var Arrws=['/js/drop_menu/tri.gif',5,10,'/js/drop_menu/tridown.gif',10,5,'/js/drop_menu/trileft.gif',5,10];	// Arrow source, width and height

function BeforeStart(){return}
function AfterBuild(){return}
function BeforeFirstOpen(){return}
function AfterCloseAll(){return}


// Menu tree
//	MenuX=new Array(Text to show, Link, background image (optional), number of sub elements, height, width);
//	For rollover images set "Text to show" to:  "rollover:Image1.jpg:Image2.jpg"

Menu1=new Array("Home","/index.html","",0,20,159);

Menu2=new Array("Resources","#","",5);
	Menu2_1=new Array("Warehouse","/cgi-bin/warehouse/cpgr_warehouse.cgi","",0,20,250); 

	Menu2_2=new Array("Genomes","/cpgr_genomes.shtml","",2);

Menu2_2_1=new Array("Bacteria", "#", "", 9,20,200 );
Menu2_2_1_1=new Array("Genome Info", "/cgi-bin/bact_gateway.pl?page=genome_info", "",0,20,200);
Menu2_2_1_2=new Array("Genome Browser","/cgi-bin/gbrowse","",0);
Menu2_2_1_3=new Array("Gene List", "/cgi-bin/bact_gateway.pl?page=all_gene_list", "", 0);
Menu2_2_1_4=new Array("RNA Gene List", "/cgi-bin/bact_gateway.pl?page=rna_gene_list", "",0);
Menu2_2_1_5=new Array("Pfam Domain List", "/cgi-bin/bact_gateway.pl?page=pfam_list", "",0);
Menu2_2_1_6=new Array("Interpro Hit List", "/cgi-bin/bact_gateway.pl?page=interpro_list", "",0);
Menu2_2_1_7=new Array("Putative SSRs", "/cgi-bin/bact_gateway.pl?page=putative_ssrs", "",0);
Menu2_2_1_8=new Array("Intergenic Regions", "/cgi-bin/bact_gateway.pl?page=intergenic_list", "",0);
Menu2_2_1_9=new Array("Unique Loci", "/cgi-bin/bact_gateway.pl?page=unique_loci", "",0);

		Menu2_2_2=new Array("Fungi", "#", "", 1);
Menu2_2_2_1=new Array("Genome Browser","/cgi-bin/fungi/gbrowse/fungi","",0,20,200);
//Menu2_2_2_1=new Array("Genome Info", "/cgi-bin/bact_gateway.pl?page=genome_info", "",0,20,200);
//Menu2_2_2_2=new Array("Gene List", "/cgi-bin/bact_gateway.pl?page=genome_info", "",0);
//Menu2_2_2_3=new Array("RNA Gene List", "/cgi-bin/bact_gateway.pl?page=genome_info", "",0);
//Menu2_2_2_4=new Array("Putative SSRs", "/cgi-bin/bact_gateway.pl?page=genome_info", "",0);
//Menu2_2_2_5=new Array("Intergenic Regions", "/cgi-bin/bact_gateway.pl?page=genome_info", "",0);

//#Menu2_2_3=new Array("Stramenopiles", "#", "", 5);
//Menu2_2_3_1=new Array("Genome Info", "/cgi-bin/bact_gateway.pl?page=genome_info", "",0,20,200);
//Menu2_2_3_2=new Array("Gene List", "/cgi-bin/bact_gateway.pl?page=genome_info", "",0);
//Menu2_2_3_3=new Array("RNA Gene List", "/cgi-bin/bact_gateway.pl?page=genome_info", "",0);
//Menu2_2_3_4=new Array("Putative SSRs", "/cgi-bin/bact_gateway.pl?page=genome_info", "",0);
//Menu2_2_3_5=new Array("Intergenic Regions", "/cgi-bin/bact_gateway.pl?page=genome_info", "",0);

	Menu2_3=new Array("Transcript Assemblies","/cpgr_ta.shtml","",4);
Menu2_3_1=new Array("TA Overview", "/cpgr_ta.shtml", "",0,20,200 );
Menu2_3_2=new Array("Current Release","/cgi-bin/cpgr_ta/cpgr_ta_release.pl" , "", 0); 
Menu2_3_3=new Array("TA Accession Search", "/cpgr_ta_search_acc.shtml", "", 0);
Menu2_3_4=new Array("TA Annotation Search", "/cpgr_ta_search_anno.shtml", "", 0);
	Menu2_4=new Array("Ribosomal rDNA DB","/cgi-bin/cpgr_rdna/cpgr_rdna_db.pl","",0);

Menu2_5=new Array("SSR Candidate Marker Search Tool", "/cpgr_ssr_marker_pred.shtml", "",0);

Menu3=new Array("Diagnostics","#","",4);
	Menu3_1=new Array("Xanthomonas", "/cpgr_diag_xan.shtml", "", 0 , 20, 250);
	Menu3_2=new Array("Pythium", "/cpgr_diag.shtml", "", 0);
	Menu3_3=new Array("Meloidgyne", "/cpgr_diag.shtml", "", 0);
Menu3_4=new Array("SSR Candidate Marker Search Tool", "/cpgr_ssr_marker_pred.shtml", "",0);

Menu4=new Array("BLAST","/cpgr_blast.shtml","",0);

Menu5=new Array("Download","#","",2);
	Menu5_1=new Array("Download Index","cpgr_download_index.shtml","",0,20,180);
	Menu5_2=new Array("FTP Site","ftp://ftp.plantbiology.msu.edu/pub/data/CPGR","",0);

Menu6=new Array("Info","#","",6);
	Menu6_1=new Array("Project Overview","/cpgr_overview.shtml","",0,20,180);
	Menu6_2=new Array("Workshops","/cpgr_training.shtml","", 0);
//Menu6_3=new Array("Site Map","/cpgr_sitemap.shtml","",0);
	Menu6_3=new Array("FAQs","/cpgr_faqs.shtml","",0);
	Menu6_4=new Array("Contact Us","/cpgr_contact.shtml#contact","",0);
	Menu6_5=new Array("Mailing List","/cpgr_contact.shtml#list","",0);
	Menu6_6=new Array("Links","/cpgr_links.shtml","",0);